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Walk-thrus & tutorials:

Evaluate X-ray structure: Typical steps for a published X-ray crystal structure or one still undergoing refinement.

Evaluate NMR structure: Typical steps for a published NMR ensemble or one still undergoing refinement.

Fix up structure: Rebuild the model to remove outliers as part of the refinement cycle.

Work with kinemages: Create and view interactive 3-D graphics from your web browser.

What's new in 3.15:

  • Python version of coot chart.
  • More control over main analysis.
  • Ability to remove Hs in Edit PDB.
  • New extension (F) on name to indicate flips.

Common questions:

Cite MolProbity: Davis et al. (2007) MolProbity: all-atom contacts and structure validation for proteins and nucleic acids. Nucleic Acids Research 35:W375-W383.

Installing Java: how to make kinemage graphics work in your browser.

Download MolProbity: how can I run a private MolProbity server, or run from the command line?

NB: the back button doesn't work inside MolProbity